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Basic Information
Locus ID: GOSA_00020044
Species & Taxonomic ID: Suaeda aralocaspica & 224144
Genome Assembly: GCA_016808085.1
Short Name: GLT1
Description: glutamate synthase
Maps and Mapping Data
Chromosome Start End Strand ID
Contig487 868299 881420 - GOSA_00020044
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.26 296,618.25 Da 36.88 81.21 -0.34
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00713 GltS 116 550 0.0 -
CDD cd02808 GltS_FMN 962 1341 7.90054E-169 IPR002932
CDD cd00982 gltB_C 1389 1638 3.50929E-150 IPR002489
Pfam PF01493 GXGXG motif 1412 1598 2.8E-86 IPR002489
Pfam PF04898 Glutamate synthase central domain 605 893 1.5E-110 IPR006982
Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 1733 1844 4.2E-21 IPR028261
Pfam PF01493 GXGXG motif 1958 2066 3.9E-49 IPR002489
Pfam PF01645 Conserved region in glutamate synthase 960 1329 2.6E-152 IPR002932
Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2325 2651 1.0E-23 IPR023753
Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 2201 2312 4.2E-21 IPR028261
Pfam PF13450 NAD(P)-binding Rossmann-like domain 1861 1896 3.7E-8 -
Pfam PF00310 Glutamine amidotransferases class-II 116 555 7.4E-179 IPR017932
SUPERFAMILY SSF46548 alpha-helical ferredoxin 2180 2334 3.87E-36 -
SUPERFAMILY SSF69336 Alpha subunit of glutamate synthase, C-terminal domain 1381 1645 1.57E-97 IPR036485
SUPERFAMILY SSF51395 FMN-linked oxidoreductases 601 1365 1.14E-251 -
SUPERFAMILY SSF56235 N-terminal nucleophile aminohydrolases (Ntn hydrolases) 116 558 1.24E-144 IPR029055
SUPERFAMILY SSF69336 Alpha subunit of glutamate synthase, C-terminal domain 1958 2113 4.32E-58 IPR036485
SUPERFAMILY SSF51905 FAD/NAD(P)-binding domain 2322 2664 3.24E-57 IPR036188
SUPERFAMILY SSF46548 alpha-helical ferredoxin 1712 1866 3.87E-36 -
SUPERFAMILY SSF51971 Nucleotide-binding domain 1856 1971 1.41E-25 -
Gene3D G3DSA:2.160.20.60 - 1377 1643 1.6E-111 IPR036485
Gene3D G3DSA:3.40.50.720 - 2325 2432 4.4E-15 -
Gene3D G3DSA:3.50.50.60 - 2433 2595 1.6E-31 IPR036188
Gene3D G3DSA:2.160.20.60 - 1952 2124 2.0E-68 IPR036485
Gene3D G3DSA:3.20.20.70 Aldolase class I 581 944 1.1E-130 IPR013785
Gene3D G3DSA:3.50.50.60 - 1857 1911 1.9E-10 IPR036188
Gene3D G3DSA:3.20.20.70 Aldolase class I 945 1376 6.5E-203 IPR013785
Gene3D G3DSA:1.10.1060.10 - 1689 1856 6.3E-42 IPR009051
Gene3D G3DSA:1.10.1060.10 - 2157 2324 6.3E-42 IPR009051
Gene3D G3DSA:3.60.20.10 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 116 567 2.5E-194 IPR029055
TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 2180 2666 2.2E-225 IPR006005
ProSiteProfiles PS51278 Glutamine amidotransferase type 2 domain profile. 116 532 20.898659 IPR017932
PRINTS PR00419 Adrenodoxin reductase family signature 2470 2484 4.1E-23 -
PRINTS PR00419 Adrenodoxin reductase family signature 2326 2348 4.1E-23 -
PRINTS PR00419 Adrenodoxin reductase family signature 2392 2402 4.1E-23 -
PRINTS PR00419 Adrenodoxin reductase family signature 2349 2362 4.1E-23 -
MobiDBLite mobidb-lite consensus disorder prediction 2666 2694 - -
MobiDBLite mobidb-lite consensus disorder prediction 2675 2694 - -
Coils Coil Coil 1680 1700 - -
Coils Coil Coil 2148 2168 - -
Coils Coil Coil 735 755 - -
Gene Ontology
Biological Process:
GO:0006537 (glutamate biosynthetic process) GO:0008152 (metabolic process)
Molecular Function:
GO:0003824 (catalytic activity) GO:0015930 (glutamate synthase activity) GO:0016491 (oxidoreductase activity) GO:0016638 (oxidoreductase activity, acting on the CH-NH2 group of donors) GO:0016639 (oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor) GO:0051536 (iron-sulfur cluster binding)
KEGG Pathway
KO Term:
K00264 (glutamate synthase (NADH) [EC:1.4.1.14])
Pathway:
ko00250 (Alanine, aspartate and glutamate metabolism) map00250 (Alanine, aspartate and glutamate metabolism) ko00910 (Nitrogen metabolism) map00910 (Nitrogen metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01120 (Microbial metabolism in diverse environments) map01120 (Microbial metabolism in diverse environments) ko01230 (Biosynthesis of amino acids) map01230 (Biosynthesis of amino acids)
Reaction:
R00093 (2 L-Glutamate + NAD+ <=> L-Glutamine + 2-Oxoglutarate + NADH + H+) R00114 (2 L-Glutamate + NADP+ <=> L-Glutamine + 2-Oxoglutarate + NADPH + H+) R00248 (L-Glutamate + NADP+ + H2O <=> 2-Oxoglutarate + Ammonia + NADPH + H+)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G53460.1 NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase 0
RefSeq XP_021729067.1 glutamate synthase 1 [NADH], chloroplastic-like isoform X1 [Chenopodium quinoa] 0
Swiss-Prot Q9LV03 Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLT1 PE=1 SV=2 0
TrEMBL A0A803L2M5 glutamate synthase (NADH) OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 2 jg13893, jg2196
Aizoaceae Mesembryanthemum crystallinum 1 gene_3295
Amaranthaceae Atriplex hortensis 1 Ah018647
Amaranthaceae Beta vulgaris 1 BVRB_3g052140
Amaranthaceae Salicornia bigelovii 2 Sbi_jg15107, Sbi_jg55939
Amaranthaceae Salicornia europaea 1 Seu_jg26420
Amaranthaceae Suaeda aralocaspica 1 GOSA_00020044
Amaranthaceae Suaeda glauca 5 Sgl01374, Sgl01440, Sgl01441, Sgl06449, Sgl06528
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000000510, gene:ENSEOMG00000031859 ...
gene:ENSEOMG00000043885
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.3AG0004880, CQ.Regalona.r1.3BG0004920
Anacardiaceae Pistacia vera 1 pistato.v30185180
Apiaceae Apium graveolens 2 Ag10G02525, AgUnG00467
Arecaceae Cocos nucifera 2 COCNU_03G013130, scaffold000561G000020
Arecaceae Phoenix dactylifera 2 gene-LOC103708325, gene-LOC103713334
Asparagaceae Asparagus officinalis 1 AsparagusV1_05.2833.V1.1
Asteraceae Flaveria trinervia 1 Ftri18G12439
Brassicaceae Arabidopsis thaliana 1 AT5G53460.1
Brassicaceae Eutrema salsugineum 1 Thhalv10012414m.g.v1.0
Brassicaceae Schrenkiella parvula 1 Sp6g15593.v2.2
Brassicaceae Brassica nigra 1 BniB08g016600.2N
Casuarinaceae Casuarina equisetifolia 1 Ceq09G1606
Casuarinaceae Casuarina glauca 1 Cgl09G1742
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno02g12650, gene.Cymno12g01560
Dunaliellaceae Dunaliella salina 1 Dusal.0052s00003.v1.0
Hydrocharitaceae Thalassia testudinum 2 gene.Thate03g24920, gene.Thate09g14990
Nitrariaceae Nitraria sibirica 1 evm.TU.LG01.2897
Plantaginaceae Plantago ovata 1 Pov_00041146
Plumbaginaceae Limonium bicolor 2 Lb0G37740, Lb7G32942
Poaceae Echinochloa crus-galli 5 AH02.2769, AH05.1457, BH02.2852, BH05.1626, CH02.3687
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_1AG0028780, gene-QOZ80_1BG0079010 ...
gene-QOZ80_5AG0363860, gene-QOZ80_5BG0411960
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0280530.1
Poaceae Lolium multiflorum 2 gene-QYE76_054594, gene-QYE76_054602
Poaceae Oryza coarctata 4 Oco01G017400, Oco02G017650, Oco09G016320, Oco10G016130
Poaceae Oryza sativa 2 LOC_Os01g48960.1, LOC_Os05g48200.1
Poaceae Paspalum vaginatum 3 gene-BS78_03G233100, gene-BS78_03G236800 ...
gene-BS78_09G229900
Poaceae Puccinellia tenuiflora 1 Pt_Chr0602367
Poaceae Sporobolus alterniflorus 3 Chr02G012560, Chr03G013590, Chr08G013750
Poaceae Thinopyrum elongatum 1 Tel3E01G442300
Poaceae Triticum dicoccoides 2 gene_TRIDC3AG039670, gene_TRIDC3BG044820
Poaceae Triticum aestivum 3 TraesCS3A02G266300.1, TraesCS3B02G299800.1 ...
TraesCS3D02G266400.1
Poaceae Zea mays 3 Zm00001eb156610_P002, Zm00001eb295220_P001 ...
Zm00001eb360480_P005
Poaceae Zoysia japonica 2 nbis-gene-12580, nbis-gene-26118
Poaceae Zoysia macrostachya 2 Zma_g10886, Zma_g8437
Portulacaceae Portulaca oleracea 1 evm.TU.LG06.1967
Posidoniaceae Posidonia oceanica 2 gene.Posoc08g13790, gene.Posoc09g09130
Rhizophoraceae Bruguiera sexangula 2 evm.TU.Scaffold_1_RagTag.622, evm.TU.Scaffold_2_RagTag.1648
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-3559, nbisL1-mrna-7507
Rhizophoraceae Ceriops tagal 2 nbisL1-mrna-2555, nbisL1-mrna-921
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-14013, nbisL1-mrna-5641
Rhizophoraceae Kandelia candel 2 evm.TU.utg000009l.314, evm.TU.utg000012l.386
Rhizophoraceae Kandelia obovata 2 Maker00005974, Maker00011451
Rhizophoraceae Rhizophora apiculata 2 nbisL1-mrna-2744, nbisL1-mrna-8412
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-16769, nbisL1-mrna-743
Salicaceae Populus euphratica 3 populus_peu28067, populus_peu29502, populus_peu29503
Solanaceae Lycium barbarum 1 gene-LOC132632063
Solanaceae Solanum pennellii 1 gene-LOC107013700
Tamaricaceae Reaumuria soongarica 1 gene_5260
Tamaricaceae Tamarix chinensis 1 TC06G1506
Zosteraceae Zostera marina 2 Zosma01g06270.v3.1, Zosma01g22390.v3.1
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