Basic Information
Locus ID:
GOSA_00019971
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
ATPase family associated with various cellular activities (AAA)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig487 | 73399 | 79683 | - | GOSA_00019971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 92,597.11 Da | 40.98 | 87.11 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 547 | 680 | 9.49546E-24 | - |
| Pfam | PF17862 | AAA+ lid domain | 701 | 743 | 7.6E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 549 | 679 | 2.5E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 508 | 744 | 5.95E-59 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 681 | 752 | 9.7E-94 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 508 | 680 | 9.7E-94 | IPR027417 |
| SMART | SM00382 | AAA_5 | 545 | 682 | 1.7E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 652 | 671 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 434 | 455 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 760 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 740 | 782 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 491 | - | - |
| Coils | Coil | Coil | 732 | 752 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_010671575.1 | uncharacterized protein LOC104888335 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QMI3 | AAA domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_167600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology