Basic Information
Locus ID:
GOSA_00019691
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig159 | 266477 | 281435 | - | GOSA_00019691 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.99 | 261,656.38 Da | 55.75 | 89.94 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 26 | 173 | 3.0E-57 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 24 | 206 | 1.28E-60 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 21 | 185 | 7.8E-69 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 7 | 181 | 6.2E-32 | IPR001752 |
| ProSiteProfiles | PS50209 | CARD caspase recruitment domain profile. | 538 | 609 | 8.636698 | IPR001315 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 1 | 173 | 62.470909 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 69 | 80 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 37 | 54 | 1.0E-25 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 70 | 88 | 1.0E-25 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 123 | 144 | 1.0E-25 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 401 | 424 | - | - |
| Coils | Coil | Coil | 2099 | 2175 | - | - |
| Coils | Coil | Coil | 262 | 296 | - | - |
| Coils | Coil | Coil | 949 | 983 | - | - |
| Coils | Coil | Coil | 187 | 207 | - | - |
| Coils | Coil | Coil | 696 | 744 | - | - |
| Coils | Coil | Coil | 1899 | 1926 | - | - |
| Coils | Coil | Coil | 1814 | 1891 | - | - |
| Coils | Coil | Coil | 653 | 673 | - | - |
| Coils | Coil | Coil | 991 | 1032 | - | - |
| Coils | Coil | Coil | 828 | 855 | - | - |
| Coils | Coil | Coil | 1647 | 1681 | - | - |
| Coils | Coil | Coil | 1520 | 1547 | - | - |
| Coils | Coil | Coil | 2258 | 2278 | - | - |
| Coils | Coil | Coil | 1766 | 1807 | - | - |
| Coils | Coil | Coil | 629 | 649 | - | - |
| Coils | Coil | Coil | 419 | 467 | - | - |
| Coils | Coil | Coil | 803 | 823 | - | - |
| Coils | Coil | Coil | 550 | 598 | - | - |
| Coils | Coil | Coil | 1439 | 1466 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021731704.1 | kinesin-like protein KIN-12F [Chenopodium quinoa] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LE15 | Kinesin motor domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology