Basic Information
Locus ID:
GOSA_00019006
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig319 | 395082 | 412254 | - | GOSA_00019006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 114,702.74 Da | 31.76 | 95.76 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 721 | 985 | 3.55019E-91 | - |
| Pfam | PF11721 | Malectin domain | 456 | 639 | 4.4E-40 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 719 | 982 | 4.8E-49 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 357 | 416 | 1.3E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 701 | 1010 | 8.63E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 91 | 435 | 3.23E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 264 | 454 | 5.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 132 | 263 | 1.1E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 791 | 990 | 6.5E-59 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 456 | 642 | 1.2E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 790 | 3.8E-36 | - |
| SMART | SM00220 | serkin_6 | 715 | 983 | 3.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 715 | 989 | 37.375256 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 721 | 743 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 835 | 847 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021760642.1 | LOW QUALITY PROTEIN: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Chenopodium quinoa] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R015 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_122240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology