Basic Information
Locus ID:
GOSA_00019003
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig319 | 348087 | 362189 | - | GOSA_00019003 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 95,362.32 Da | 35.23 | 88.24 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 555 | 817 | 3.2314E-96 | - |
| Pfam | PF11721 | Malectin domain | 286 | 470 | 2.2E-42 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 177 | 236 | 3.6E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 552 | 815 | 2.3E-49 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 284 | 8.25E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 532 | 850 | 7.24E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 625 | 824 | 7.8E-60 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 288 | 474 | 2.0E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 7 | 173 | 5.9E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 287 | 4.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 521 | 624 | 2.0E-36 | - |
| SMART | SM00220 | serkin_6 | 549 | 817 | 6.0E-38 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 225 | 247 | 7.157505 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 549 | 823 | 38.025421 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 669 | 681 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 555 | 577 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021864481.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Spinacia oleracea] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R015 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_122240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology