Basic Information
Locus ID:
GOSA_00018909
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig576 | 538025 | 539272 | - | GOSA_00018909 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 46,409.56 Da | 43.76 | 76.55 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02214 | BTB/POZ domain | 4 | 52 | 1.1E-6 | IPR003131 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 73 | 393 | 6.28E-13 | IPR011047 |
| SUPERFAMILY | SSF54695 | POZ domain | 4 | 54 | 2.47E-11 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 2 | 57 | 1.7E-10 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 114 | 408 | 6.7E-6 | IPR015943 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24240.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021755564.1 | BTB/POZ domain-containing protein At2g24240-like [Chenopodium quinoa] | 0 |
| Q9ZUH1 | BTB/POZ domain-containing protein At2g24240 OS=Arabidopsis thaliana OX=3702 GN=At2g24240 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LXT1 | BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg15590, jg31544 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25296 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031681 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19389, Sbi_jg43963 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17972 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00018909 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl65242, Sgl65244, Sgl69655 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000015168, gene:ENSEOMG00000020478 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2AG0000220, CQ.Regalona.r1.4AG0024150 |
| Apiaceae | Apium graveolens | 1 | Ag2G00423 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G005160, COCNU_11G012020 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103710478, gene-LOC103714238 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.1861.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G06711 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G24240.1, AT4G30940.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000165m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g03210.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g022060.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq03G2550, Ceq03G2599 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl03G2689, Cgl03G2748 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g05970 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g09520 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-280 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.274 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000857 |
| Poaceae | Echinochloa crus-galli | 5 | AH07.2580, BH07.2392, BH09.1656, CH07.2466, CH09.1765 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0137260, gene-QOZ80_4AG0311690 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0179320.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_023569 |
| Poaceae | Oryza coarctata | 3 | Oco04G015700, Oco07G009900, Oco08G009680 |
| Poaceae | Oryza sativa | 3 | LOC_Os02g39910.1, LOC_Os04g42310.1, LOC_Os06g06480.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G194100, gene-BS78_06G150700 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0204572, Pt_Chr0204629, Pt_Chr0302220 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr06G008430, Chr13G007720, Chr15G009940, Chr23G009490 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G623400, Tel6E01G426200 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC1BG064300, gene_TRIDC2AG051650 ... |
| Poaceae | Triticum aestivum | 10 | TraesCS1A02G380600.1, TraesCS1B02G402800.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb172250_P001, Zm00001eb425960_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-18549, nbis-gene-29670, nbis-gene-37000 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g13881, Zma_g16657, Zma_g19995 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.321, evm.TU.LG26.717 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g12730 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-13914, nbisL1-mrna-25300 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-21280, nbisL1-mrna-5648 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4932 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.471, add.evm.TU.utg000033l.25 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00000797, Maker00014624, Maker00014868 |
| Rhizophoraceae | Rhizophora apiculata | 3 | nbisL1-mrna-17482, nbisL1-mrna-22177, nbisL1-mrna-23533 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-14519, nbisL1-mrna-9211 |
| Salicaceae | Populus euphratica | 2 | populus_peu05593, populus_peu12234 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132602973, gene-LOC132638026, gene-LOC132638829 |
| Solanaceae | Solanum chilense | 7 | SOLCI001360000, SOLCI002621600, SOLCI003769300 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107005936, gene-LOC107005937, gene-LOC107005938 ... |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9051 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1056 |