Basic Information
Locus ID:
GOSA_00018849
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig532 | 1580964 | 1590361 | - | GOSA_00018849 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 48,265.30 Da | 35.93 | 105.79 | 0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 412 | 2.93143E-44 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 381 | 2.7E-24 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 412 | 3.53E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 7 | 416 | 6.6E-40 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 426 | 9.548434 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_010690317.1 | hippocampus abundant transcript 1 protein [Beta vulgaris subsp. vulgaris] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QD99 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_192340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology