Basic Information
Locus ID:
GOSA_00018418
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig21 | 1062884 | 1067988 | - | GOSA_00018418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 70,260.29 Da | 49.14 | 71.62 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 15 | 270 | 4.91698E-136 | - |
| Pfam | PF00069 | Protein kinase domain | 16 | 270 | 5.2E-69 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 288 | 4.79E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 95 | 4.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 96 | 282 | 5.2E-57 | - |
| SMART | SM00220 | serkin_6 | 16 | 270 | 2.1E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 16 | 270 | 46.604759 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 22 | 45 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 461 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_010672750.1 | serine/threonine-protein kinase Nek6 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LT35 | Serine/threonine-protein kinase Nek6 OS=Arabidopsis thaliana OX=3702 GN=NEK6 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803MA52 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology