Basic Information
Locus ID:
GOSA_00018267
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig99 | 1288158 | 1292686 | - | GOSA_00018267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 66,598.45 Da | 46.93 | 46.94 | -1.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 365 | 409 | 0.00152139 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 362 | 402 | 4.29E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 352 | 411 | 3.4E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 621 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 515 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 552 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 553 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 606 | 621 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_048495138.1 | sister chromatid cohesion protein PDS5 homolog C isoform X3 [Beta vulgaris subsp. vulgaris] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9R3I5 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_111020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology