Basic Information
Locus ID:
GOSA_00018173
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig99 | 418242 | 422083 | + | GOSA_00018173 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 102,511.82 Da | 37.56 | 90.28 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 604 | 878 | 3.15325E-96 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 43 | 77 | 4.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 387 | 446 | 4.9E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 105 | 163 | 3.7E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 359 | 384 | 0.0037 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 602 | 875 | 1.0E-46 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 206 | 225 | 0.59 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 586 | 892 | 2.97E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 354 | 452 | 2.76E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 321 | 2.38E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 347 | 472 | 2.3E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 676 | 897 | 3.9E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 344 | 8.4E-78 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 559 | 675 | 4.9E-37 | - |
| SMART | SM00369 | LRR_typ_2 | 201 | 224 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 149 | 0.021 | IPR003591 |
| SMART | SM00220 | serkin_6 | 598 | 879 | 3.5E-47 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 150 | 174 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 277 | 301 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 409 | 432 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 455 | 130.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 598 | 879 | 40.668476 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 723 | 735 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 604 | 626 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 916 | 952 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021847754.1 | receptor protein kinase TMK1-like [Spinacia oleracea] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R4J8 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_106740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology