Basic Information
Locus ID:
GOSA_00018166
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig99 | 363639 | 367093 | - | GOSA_00018166 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 113,019.74 Da | 35.84 | 101.41 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 4.5E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 146 | 204 | 1.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 690 | 966 | 7.4E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 502 | 562 | 2.4E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 969 | 3.24E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 58 | 384 | 2.41E-54 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 291 | 604 | 1.96E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 979 | 5.7E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 185 | 288 | 3.8E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 671 | 767 | 6.6E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 455 | 631 | 5.4E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 384 | 454 | 1.5E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 184 | 6.0E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 383 | 7.4E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 118 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 573 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 501 | 525 | 65.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 688 | 975 | 1.1E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 688 | 975 | 37.474194 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 820 | 832 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 694 | 717 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 549 | 562 | 7.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 528 | 541 | 7.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_021739110.1 | receptor-like protein kinase HSL1 [Chenopodium quinoa] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LBI9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology