HalophFGD

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Basic Information
Locus ID: GOSA_00017791
Species & Taxonomic ID: Suaeda aralocaspica & 224144
Genome Assembly: GCA_016808085.1
Description: WD repeat-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
Contig56 83613 85258 + GOSA_00017791
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.60 21,733.56 Da 59.61 70.46 -0.47
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF50978 WD40 repeat-like 33 123 9.57E-6 IPR036322
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K20241 (WD repeat-containing protein 44)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G53500.1 Transducin/WD40 repeat-like superfamily protein. 0
RefSeq XP_021774976.1 WD repeat-containing protein 44-like [Chenopodium quinoa] 0
TrEMBL A0A803MUQ3 WD_REPEATS_REGION domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah021556
Amaranthaceae Suaeda aralocaspica 1 GOSA_00017791
Plumbaginaceae Limonium bicolor 4 Lb0G37719, Lb1G03647, Lb3G15574, Lb6G30568
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.