Basic Information
Locus ID:
GOSA_00017413
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig223 | 1469712 | 1473289 | - | GOSA_00017413 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 59,335.81 Da | 43.34 | 94.90 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14624 | VWA / Hh protein intein-like | 404 | 475 | 1.4E-5 | IPR032838 |
| Pfam | PF13768 | von Willebrand factor type A domain | 67 | 224 | 2.9E-6 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 63 | 235 | 2.23E-11 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 57 | 242 | 4.5E-14 | IPR036465 |
| SMART | SM00327 | VWA_4 | 65 | 236 | 3.3E-5 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 67 | 250 | 13.528418 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54780.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_010675828.1 | E3 ubiquitin-protein ligase WAV3 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803LXY2 | VWFA domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology