Basic Information
Locus ID:
GOSA_00017324
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig223 | 679586 | 681646 | - | GOSA_00017324 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 59,102.68 Da | 39.83 | 90.40 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 26 | 254 | 5.78805E-72 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 26 | 255 | 1.3E-60 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 353 | 491 | 4.5E-26 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 26 | 256 | 2.38E-61 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 331 | 498 | 3.64E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 501 | 1.0E-17 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 23 | 259 | 2.7E-66 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 314 | 428 | 2.4E-27 | - |
| SMART | SM00220 | serkin_6 | 353 | 525 | 6.0E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 526 | 23.933821 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 359 | 382 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 139 | 145 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 476 | 488 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021771395.1 | probable L-type lectin-domain containing receptor kinase S.7 [Chenopodium quinoa] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MWM2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology