Basic Information
Locus ID:
GOSA_00017178
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig110 | 1672028 | 1676548 | - | GOSA_00017178 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 75,782.52 Da | 41.52 | 85.66 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 379 | 648 | 9.29154E-96 | - |
| CDD | cd09218 | TLP-PA | 28 | 250 | 9.80019E-87 | - |
| Pfam | PF00069 | Protein kinase domain | 375 | 576 | 1.6E-49 | IPR000719 |
| Pfam | PF00314 | Thaumatin family | 33 | 251 | 4.5E-60 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 26 | 252 | 9.81E-63 | IPR037176 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 669 | 5.8E-81 | IPR011009 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 27 | 251 | 3.4E-69 | IPR037176 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 654 | 7.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 449 | 5.2E-38 | - |
| SMART | SM00220 | serkin_6 | 373 | 646 | 1.0E-36 | IPR000719 |
| SMART | SM00205 | tha2 | 29 | 251 | 4.6E-60 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 26 | 251 | 34.333496 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 373 | 654 | 38.98653 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 496 | 508 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 379 | 401 | - | IPR017441 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 241 | 250 | 1.7E-10 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 28 | 40 | 1.7E-10 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 130 | 146 | 1.7E-10 | IPR001938 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 298 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021719634.1 | cysteine-rich receptor-like protein kinase 15 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803M241 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22061 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40868, Sbi_jg40875 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg1602, Seu_jg1603, Seu_jg4259 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017178 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl46180, Sgl46197, Sgl50876, Sgl50880, Sgl50932 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000010508, gene:ENSEOMG00000031315 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0002470, CQ.Regalona.r1.8BG0002450 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1797, evm.TU.LG18.811, evm.TU.LG20.1079 ... |