Basic Information
Locus ID:
GOSA_00017174
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig110 | 1624191 | 1635533 | + | GOSA_00017174 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 146,816.89 Da | 35.18 | 84.19 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 352 | 615 | 1.89873E-94 | - |
| CDD | cd14066 | STKc_IRAK | 991 | 1256 | 2.91374E-96 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 164 | 256 | 3.1E-9 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 987 | 1196 | 7.2E-51 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 787 | 878 | 1.7E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 659 | 757 | 9.1E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 133 | 7.0E-14 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 348 | 615 | 4.3E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 970 | 1276 | 1.35E-82 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 331 | 641 | 4.99E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 648 | 760 | 2.1E-23 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1061 | 1260 | 3.2E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 946 | 1060 | 4.4E-36 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 136 | 1.9E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 150 | 258 | 1.3E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 421 | 8.6E-35 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 767 | 881 | 3.8E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 623 | 2.9E-59 | - |
| SMART | SM00220 | serkin_6 | 346 | 593 | 3.2E-38 | IPR000719 |
| SMART | SM00220 | serkin_6 | 985 | 1254 | 1.4E-38 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 648 | 760 | 18.607042 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 769 | 881 | 15.1944 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 622 | 39.184406 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 136 | 16.99577 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 985 | 1260 | 40.626076 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 148 | 258 | 16.61558 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 352 | 374 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 991 | 1013 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 467 | 479 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1104 | 1116 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_019052010.1 | PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104590182 [Nelumbo nucifera] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1U8Q1U3 | LOW QUALITY PROTEIN: uncharacterized protein LOC104590182 OS=Nelumbo nucifera OX=4432 GN=LOC104590182 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017174 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl46171, Sgl46195, Sgl50867, Sgl50873 |