Basic Information
Locus ID:
GOSA_00017092
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig110 | 928866 | 933026 | + | GOSA_00017092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 112,542.94 Da | 31.14 | 94.53 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 142 | 161 | 0.47 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 688 | 970 | 1.6E-40 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 64 | 3.9E-11 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 973 | 4.72E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 282 | 442 | 1.09E-23 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 72 | 579 | 6.59E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 781 | 994 | 2.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 619 | 8.9E-102 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 204 | 7.8E-45 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 670 | 780 | 9.9E-22 | - |
| SMART | SM00220 | serkin_6 | 686 | 977 | 4.0E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 982 | 34.930073 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 825 | 837 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 692 | 715 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010686396.1 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LLM4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology