Basic Information
Locus ID:
GOSA_00016596
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig202 | 258979 | 260340 | - | GOSA_00016596 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 49,881.39 Da | 28.44 | 116.69 | 0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 6 | 317 | 1.6E-36 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 383 | 432 | 2.3E-15 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 3 | 371 | 1.8E-72 | - |
| PIRSF | PIRSF006060 | AA_transporter | 328 | 449 | 1.1 | - |
| PIRSF | PIRSF006060 | AA_transporter | 3 | 381 | 9.6E-51 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_010687038.2 | cationic amino acid transporter 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438DVT1 | Cationic amino acid transporter 1 OS=Vitis vinifera OX=29760 GN=CAT1_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology