Basic Information
Locus ID:
GOSA_00015754
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig200 | 128825 | 131886 | - | GOSA_00015754 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 43,009.51 Da | 39.06 | 90.93 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 198 | 328 | 1.9E-11 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 37 | 114 | 1.7E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 193 | 328 | 1.31E-16 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 32 | 173 | 9.29E-19 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 26 | 173 | 1.5E-11 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 190 | 329 | 1.4E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 224 | 329 | 1.0E-12 | IPR000782 |
| SMART | SM00554 | fasc_3 | 62 | 176 | 0.39 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 186 | 326 | 9.349369 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 26 | 173 | 11.484045 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 372 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_021766350.1 | fasciclin-like arabinogalactan protein 2 [Chenopodium quinoa] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803MGL8 | Fasciclin-like arabinogalactan protein 2 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology