Basic Information
Locus ID:
GOSA_00015468
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig71 | 1560115 | 1563492 | + | GOSA_00015468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 103,231.28 Da | 30.99 | 100.77 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 281 | 300 | 0.99 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 88 | 110 | 1.2 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 422 | 438 | 0.35 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 207 | 222 | 1.0 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 627 | 899 | 7.2E-47 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 225 | 5.03E-49 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 173 | 512 | 2.08E-66 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 622 | 903 | 1.48E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 625 | 707 | 3.5E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 257 | 2.3E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 547 | 2.4E-80 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 708 | 922 | 6.5E-59 | - |
| SMART | SM00220 | serkin_6 | 625 | 903 | 2.3E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 206 | 230 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 254 | 278 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 14 | 37 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 494 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 350 | 373 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 134 | 54.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 208 | 230 | 7.065096 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 910 | 38.025421 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 753 | 765 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 655 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_021734747.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QDZ4 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_189850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology