halophFGD

Basic Information

Locus ID: GOSA_00015280

Species & Taxonomic ID: Suaeda aralocaspica & 224144

Genome Assembly: GCA_016808085.1

Description: transposon protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Contig263	1648271	1651721	-	GOSA_00015280

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.66	23,257.17 Da	47.79	75.96	-0.55

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13963	Transposase-associated domain	4	73	1.0E-15	IPR029480
MobiDBLite	mobidb-lite	consensus disorder prediction	129	156	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	129	157	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021717050.1	uncharacterized protein LOC110684923 isoform X1 [Chenopodium quinoa]	0
TrEMBL	A0A6C0T504	Transpos_assoc domain-containing protein OS=Amaranthus palmeri OX=107608 GN=AP_R.00g000060-v1.0.a3 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	12	gene_11363, gene_14535, gene_15408, gene_22663, gene_25519 ... gene_25548, gene_25895, gene_4293, gene_7724, gene_8506, gene_8884, gene_9673
Amaranthaceae	Atriplex hortensis	3	Ah003715, Ah007052, Ah037022
Amaranthaceae	Salicornia bigelovii	43	Sbi_jg14545, Sbi_jg16734, Sbi_jg25736, Sbi_jg27296 ... Sbi_jg27496, Sbi_jg28264, Sbi_jg31840, Sbi_jg32201, Sbi_jg33024, Sbi_jg33025, Sbi_jg33340, Sbi_jg33415, Sbi_jg36423, Sbi_jg36424, Sbi_jg36425, Sbi_jg36974, Sbi_jg36975, Sbi_jg41359, Sbi_jg41360, Sbi_jg41836, Sbi_jg41853, Sbi_jg44230, Sbi_jg44592, Sbi_jg44594, Sbi_jg4618, Sbi_jg47772, Sbi_jg48469, Sbi_jg48630, Sbi_jg50062, Sbi_jg50347, Sbi_jg53713, Sbi_jg53806, Sbi_jg56783, Sbi_jg56787, Sbi_jg56861, Sbi_jg56995, Sbi_jg56996, Sbi_jg57313, Sbi_jg5801, Sbi_jg60107, Sbi_jg60108, Sbi_jg60472, Sbi_jg9872
Amaranthaceae	Salicornia europaea	44	Seu_jg10099, Seu_jg10376, Seu_jg10425, Seu_jg10537 ... Seu_jg10589, Seu_jg10685, Seu_jg10749, Seu_jg12732, Seu_jg12733, Seu_jg13260, Seu_jg13557, Seu_jg14710, Seu_jg1503, Seu_jg17149, Seu_jg17150, Seu_jg17688, Seu_jg17923, Seu_jg1937, Seu_jg22012, Seu_jg22544, Seu_jg22603, Seu_jg22604, Seu_jg24291, Seu_jg24617, Seu_jg24761, Seu_jg27629, Seu_jg27668, Seu_jg27854, Seu_jg27857, Seu_jg3817, Seu_jg3966, Seu_jg4158, Seu_jg4254, Seu_jg4255, Seu_jg4258, Seu_jg4594, Seu_jg6964, Seu_jg6967, Seu_jg7124, Seu_jg7125, Seu_jg7208, Seu_jg7249, Seu_jg7408, Seu_jg7906
Amaranthaceae	Suaeda aralocaspica	28	GOSA_00003916, GOSA_00009010, GOSA_00014468, GOSA_00015280 ... GOSA_00016667, GOSA_00016996, GOSA_00018082, GOSA_00020611, GOSA_00020945, GOSA_00021170, GOSA_00021449, GOSA_00021605, GOSA_00021942, GOSA_00022002, GOSA_00022100, GOSA_00022189, GOSA_00022795, GOSA_00023211, GOSA_00023212, GOSA_00024132, GOSA_00025157, GOSA_00025730, GOSA_00025988, GOSA_00026679, GOSA_00027311, GOSA_00029154, GOSA_00029236, GOSA_00029451
Amaranthaceae	Suaeda glauca	22	Sgl03949, Sgl03953, Sgl09073, Sgl13640, Sgl14611, Sgl18821 ... Sgl19779, Sgl20462, Sgl21870, Sgl27145, Sgl27146, Sgl36035, Sgl41298, Sgl65118, Sgl65121, Sgl65630, Sgl69538, Sgl69540, Sgl69926, Sgl79183, Sgl79353, Sgl81639
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000009169, gene:ENSEOMG00000043177
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.5BG0012130, CQ.Regalona.r1.6BG0015370 ... CQ.Regalona.r1.7BG0019450, CQ.Regalona.r1.8BG0011260, CQ.Regalona.r1.9AG0008120
Arecaceae	Phoenix dactylifera	6	gene-LOC120104662, gene-LOC120104664, gene-LOC120105012 ... gene-LOC120107031, gene-LOC120108354, gene-LOC120110484
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate08g03110
Plumbaginaceae	Limonium bicolor	1	Lb7G34621
Poaceae	Paspalum vaginatum	1	gene-BS78_09G094000
Poaceae	Triticum dicoccoides	1	gene_TRIDC2AG017150
Portulacaceae	Portulaca oleracea	5	evm.TU.LG07.1296, evm.TU.LG08.476, evm.TU.LG11.534 ... evm.TU.LG11.847, evm.TU.LG20.1312
Solanaceae	Lycium barbarum	1	gene-LOC132609421