Basic Information
Locus ID:
GOSA_00015231
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig263 | 889598 | 897919 | - | GOSA_00015231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 54,271.67 Da | 37.31 | 87.62 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 365 | 436 | 7.9E-17 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 28 | 348 | 2.5E-83 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 28 | 348 | 7.67E-85 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 358 | 450 | 3.2E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 26 | 353 | 1.2E-115 | - |
| SMART | SM00768 | X8_cls | 364 | 449 | 4.5E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 262 | 275 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021727203.1 | glucan endo-1,3-beta-glucosidase 3-like [Chenopodium quinoa] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803N0L7 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology