HalophFGD

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Basic Information
Locus ID: GOSA_00014604
Species & Taxonomic ID: Suaeda aralocaspica & 224144
Genome Assembly: GCA_016808085.1
Description: Protein FAR1-RELATED SEQUENCE 5-like
Maps and Mapping Data
Chromosome Start End Strand ID
Contig138 1354452 1355381 - GOSA_00014604
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.21 36,084.29 Da 41.80 83.85 -0.47
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 145 181 9.445667 IPR007527
MobiDBLite mobidb-lite consensus disorder prediction 267 309 - -
MobiDBLite mobidb-lite consensus disorder prediction 272 286 - -
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048490450.1 protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A484N1W4 Protein FAR1-RELATED SEQUENCE OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS35770 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda aralocaspica 4 GOSA_00014604, GOSA_00014605, GOSA_00014807, GOSA_00023619
Amaranthaceae Suaeda glauca 69 Sgl00340, Sgl00670, Sgl00740, Sgl00768, Sgl02587, Sgl03588 ...
Sgl04848, Sgl05396, Sgl05687, Sgl05773, Sgl06654, Sgl07743, Sgl08711, Sgl08712, Sgl09291, Sgl09891, Sgl10123, Sgl11267, Sgl12085, Sgl12211, Sgl12282, Sgl13848, Sgl13857, Sgl15315, Sgl15331, Sgl16659, Sgl17379, Sgl17449, Sgl17512, Sgl19021, Sgl20279, Sgl21137, Sgl24726, Sgl25611, Sgl26501, Sgl30781, Sgl32060, Sgl32061, Sgl34323, Sgl34325, Sgl34387, Sgl36019, Sgl37352, Sgl39724, Sgl39726, Sgl43147, Sgl43248, Sgl44007, Sgl46477, Sgl47605, Sgl48076, Sgl48776, Sgl50199, Sgl51202, Sgl55534, Sgl64142, Sgl68597, Sgl70548, Sgl73296, Sgl76815, Sgl78827, Sgl78928, Sgl79630, Sgl79779, Sgl79784, Sgl81389, Sgl82092, Sgl82226, Sgl82229
Plumbaginaceae Limonium bicolor 3 Lb0G37147, Lb3G20849, Lb6G29885
Tamaricaceae Reaumuria soongarica 2 MSTRG.16888_chr09_+, STRG.24247_chr10_+
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.