Basic Information
Locus ID:
GOSA_00014406
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig162 | 2061578 | 2066056 | - | GOSA_00014406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 60,194.93 Da | 36.76 | 83.95 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 56 | 313 | 3.61106E-137 | - |
| Pfam | PF13833 | EF-hand domain pair | 380 | 423 | 1.7E-4 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 432 | 498 | 2.5E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 56 | 314 | 6.4E-77 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 39 | 334 | 3.51E-87 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 343 | 523 | 5.87E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 322 | 1.4E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 141 | 1.4E-25 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 323 | 500 | 3.5E-48 | - |
| SMART | SM00220 | serkin_6 | 56 | 314 | 1.6E-99 | IPR000719 |
| SMART | SM00054 | efh_1 | 472 | 500 | 2.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 433 | 461 | 0.0042 | IPR002048 |
| SMART | SM00054 | efh_1 | 361 | 389 | 9.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 397 | 425 | 0.9 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 13.927603 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 429 | 464 | 12.42125 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 56 | 314 | 50.053455 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 357 | 392 | 9.799083 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 393 | 428 | 8.962221 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 442 | 454 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 406 | 418 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 62 | 89 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 176 | 188 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 33 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_021862435.1 | calcium-dependent protein kinase 7-like [Spinacia oleracea] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RJ89 | Calcium-dependent protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_065580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology