Basic Information
Locus ID:
GOSA_00014337
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig162 | 1243336 | 1247748 | + | GOSA_00014337 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 57,749.30 Da | 41.21 | 80.43 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 68 | 387 | 1.2E-77 | IPR000490 |
| Pfam | PF07983 | X8 domain | 403 | 474 | 3.8E-18 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 68 | 388 | 5.42E-81 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 398 | 497 | 1.4E-7 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 67 | 395 | 7.7E-112 | - |
| SMART | SM00768 | X8_cls | 402 | 487 | 6.3E-44 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021728822.1 | glucan endo-1,3-beta-glucosidase 4-like [Chenopodium quinoa] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KLV4 | RRM domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology