Basic Information
Locus ID:
GOSA_00013460
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig134 | 1744778 | 1746730 | + | GOSA_00013460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 71,767.12 Da | 41.07 | 89.85 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 190 | 232 | 0.00370873 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 371 | 627 | 5.4E-35 | IPR001245 |
| Pfam | PF01476 | LysM domain | 190 | 233 | 1.1E-5 | IPR018392 |
| SUPERFAMILY | SSF54106 | LysM domain | 187 | 233 | 7.59E-5 | IPR036779 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 627 | 1.01E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 638 | 1.8E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 334 | 426 | 1.3E-16 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 187 | 243 | 8.9E-7 | IPR036779 |
| SMART | SM00257 | LysM_2 | 188 | 233 | 0.0049 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 187 | 232 | 10.968242 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 632 | 31.269367 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_010681194.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RQ17 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_041690 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology