Basic Information
Locus ID:
GOSA_00013420
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig134 | 1443353 | 1447746 | + | GOSA_00013420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 108,639.56 Da | 32.76 | 98.93 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 68 | 2.4E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 118 | 178 | 1.6E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 686 | 968 | 2.9E-38 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 970 | 9.85E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 436 | 594 | 1.08E-34 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 76 | 430 | 7.14E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 668 | 764 | 5.3E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 765 | 978 | 1.3E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 206 | 312 | 1.3E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 313 | 621 | 2.5E-76 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 205 | 9.2E-38 | IPR032675 |
| SMART | SM00220 | serkin_6 | 684 | 977 | 8.2E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 477 | 501 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 118 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 216 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 549 | 573 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 264 | 288 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 164 | 13.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 684 | 977 | 35.212753 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 690 | 713 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65710.1 | HAESA-like 2. | 0 |
| RefSeq | XP_021855408.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Spinacia oleracea] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RTK5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_031210 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology