Basic Information
Locus ID:
GOSA_00013345
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
E3 ubiquitin-protein ligase RNF182-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig134 | 789650 | 792160 | + | GOSA_00013345 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.93 | 30,277.94 Da | 48.81 | 103.22 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 45 | 97 | 2.0E-8 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 37 | 101 | 6.71E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 34 | 138 | 1.4E-11 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 45 | 100 | 9.981268 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 64 | 73 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021866329.1 | uncharacterized protein LOC110805035 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9RNN5 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_046410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology