Basic Information
Locus ID:
GOSA_00012283
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
CTR1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig327 | 2610072 | 2629957 | + | GOSA_00012283 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 89,527.04 Da | 55.16 | 81.27 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 542 | 790 | 8.32151E-130 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 151 | 358 | 6.9E-78 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 537 | 790 | 4.5E-70 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 518 | 790 | 1.13E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 529 | 614 | 2.3E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 615 | 797 | 3.6E-63 | - |
| SMART | SM00220 | serkin_6 | 536 | 793 | 4.7E-64 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 536 | 793 | 45.671913 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 542 | 563 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 657 | 669 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 651 | 669 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 610 | 623 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 761 | 783 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 698 | 708 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 717 | 739 | 1.2E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 436 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 32 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_010683877.2 | serine/threonine-protein kinase CTR1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QF25 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_186410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology