Basic Information
Locus ID:
GOSA_00011903
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig240 | 2242134 | 2244996 | + | GOSA_00011903 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.85 | 11,379.54 Da | 47.16 | 55.60 | -0.91 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 22 | 95 | 6.78377E-46 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 24 | 94 | 6.6E-25 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 3 | 100 | 1.83E-28 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 99 | 2.7E-38 | - |
| SMART | SM00213 | ubq_7 | 24 | 95 | 1.3E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 22 | 99 | 17.190887 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_021864849.1 | small ubiquitin-related modifier 1-like [Spinacia oleracea] | 0 |
| P55852 | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9RNX9 | Small ubiquitin-related modifier OS=Spinacia oleracea OX=3562 GN=SOVF_045610 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology