Basic Information
Locus ID:
GOSA_00011721
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig240 | 822709 | 831860 | - | GOSA_00011721 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 135,144.69 Da | 40.95 | 88.52 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 962 | 1205 | 1.2E-24 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 154 | 197 | 8.9E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 149 | 1.3E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 65 | 1.4E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 679 | 719 | 4.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 770 | 831 | 2.1E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 406 | 668 | 2.7E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 949 | 1210 | 1.66E-42 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 680 | 869 | 2.76E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 670 | 6.74E-64 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 246 | 2.28E-40 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 482 | 674 | 8.3E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 905 | 1011 | 1.9E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 677 | 884 | 3.6E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 481 | 1.1E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1012 | 1217 | 1.5E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 270 | 2.5E-51 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 818 | 840 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 160 | 183 | 7.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 769 | 793 | 0.93 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 936 | 1195 | 22.718298 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 675 | 34.294044 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 139 | 152 | 2.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 160 | 173 | 2.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78980.1 | STRUBBELIG-receptor family 5. | 0 |
| RefSeq | XP_021720269.1 | protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X2 [Chenopodium quinoa] | 0 |
| Q6R2K1 | Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana OX=3702 GN=SRF5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R6G6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_107630 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology