Basic Information
Locus ID:
GOSA_00011624
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig240 | 51304 | 71617 | + | GOSA_00011624 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 194,309.08 Da | 43.41 | 75.77 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 383 | 664 | 4.42138E-129 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1453 | 1716 | 1.73992E-150 | IPR044769 |
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 32 | 99 | 2.21797E-31 | - |
| Pfam | PF01363 | FYVE zinc finger | 33 | 101 | 8.0E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1492 | 1658 | 5.7E-34 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 396 | 654 | 8.1E-27 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 459 | 630 | 1.36E-39 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1444 | 1716 | 4.32E-80 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 105 | 9.59E-20 | IPR011011 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 458 | 630 | 1.1E-51 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1575 | 1717 | 1.2E-42 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 22 | 109 | 7.1E-21 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1410 | 1573 | 1.9E-36 | IPR027484 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 4.1E-18 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1426 | 1717 | 9.7E-124 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 13.008968 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1390 | 1716 | 57.76918 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1259 | 1277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1256 | 1277 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010685217.2 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S494 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Spinacia oleracea OX=3562 GN=SOVF_001970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology