Basic Information
Locus ID:
GOSA_00011440
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig43 | 1527247 | 1528547 | - | GOSA_00011440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 10,820.15 Da | 16.27 | 87.13 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 19 | 94 | 3.7E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 94 | 1.21E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 94 | 7.3E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 94 | 18.294355 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 50 | 62 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G04500.2 | - | 0 |
| RefSeq | XP_021866565.1 | cysteine-rich receptor-like protein kinase 29 [Spinacia oleracea] | 0 |
| Q9XEC6 | Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana OX=3702 GN=CRK36 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7A845 | Protein kinase domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_021172 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2136 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah003627, Ah017478, Ah017734, Ah031514 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00011440, GOSA_00012107 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000033066 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30065570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1043300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG082020, gene_TRIDC3BG079770 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-11728, nbis-gene-20192, nbis-gene-22941 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-26558, nbisL1-mrna-29828 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12602, nbisL1-mrna-24800 |
| Salicaceae | Populus euphratica | 1 | populus_peu27963 |