Basic Information
Locus ID:
GOSA_00011340
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig43 | 551447 | 555434 | + | GOSA_00011340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 54,536.91 Da | 33.80 | 89.50 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 356 | 427 | 1.5E-20 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 19 | 338 | 2.4E-76 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 19 | 338 | 8.07E-81 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 18 | 343 | 1.3E-108 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 349 | 463 | 9.2E-12 | - |
| SMART | SM00768 | X8_cls | 355 | 440 | 4.8E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 253 | 266 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010686818.1 | glucan endo-1,3-beta-glucosidase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9QUE2 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_140130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology