Basic Information
Locus ID:
GOSA_00010861
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig117 | 2098491 | 2104598 | + | GOSA_00010861 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 40,940.77 Da | 49.79 | 86.52 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 299 | 347 | 8.8E-11 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 42 | 253 | 2.99E-19 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 292 | 351 | 4.59E-19 | IPR036028 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 41 | 280 | 1.3E-9 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 281 | 357 | 1.5E-17 | - |
| SMART | SM00326 | SH3_2 | 295 | 350 | 1.5E-18 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 292 | 351 | 24.798548 | IPR001452 |
| Coils | Coil | Coil | 1 | 21 | - | - |
| Coils | Coil | Coil | 188 | 208 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_021768380.1 | SH3 domain-containing protein 2-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L6F0 | SH3 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology