Basic Information
Locus ID:
GOSA_00010746
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig117 | 1120594 | 1133656 | + | GOSA_00010746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 100,856.38 Da | 50.85 | 80.39 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 729 | 883 | 1.2932E-62 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 314 | 882 | 2.5E-86 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 42 | 139 | 1.8E-24 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 311 | 885 | 2.55E-113 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 16 | 139 | 3.53E-28 | IPR035927 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 299 | 510 | 1.1E-69 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 153 | 237 | 6.4E-8 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 8 | 152 | 1.7E-37 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 614 | 893 | 6.0E-58 | - |
| SMART | SM00695 | dusp | 37 | 142 | 1.1E-30 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 18 | 139 | 19.675577 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 313 | 885 | 61.346786 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 827 | 844 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 314 | 329 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 636 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 640 | 655 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_021757775.1 | ubiquitin carboxyl-terminal hydrolase 10-like [Chenopodium quinoa] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803L5D7 | Ubiquitin carboxyl-terminal hydrolase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology