Basic Information
Locus ID:
GOSA_00010732
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig117 | 1004956 | 1006164 | + | GOSA_00010732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 45,620.11 Da | 49.09 | 86.47 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 37 | 181 | 1.3E-18 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 220 | 267 | 3.4E-12 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 215 | 289 | 2.09E-19 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 205 | 285 | 1.6E-18 | IPR036638 |
| SMART | SM00353 | finulus | 224 | 273 | 8.4E-15 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 218 | 267 | 17.002554 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 198 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 229 | - | - |
| Coils | Coil | Coil | 257 | 284 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_021855535.1 | transcription factor bHLH14-like [Spinacia oleracea] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RQ50 | BHLH domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_046870 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology