Basic Information
Locus ID:
GOSA_00009619
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig83 | 3420574 | 3424445 | + | GOSA_00009619 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 62,700.56 Da | 48.76 | 92.05 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 47 | 83 | 8.7E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 43 | 114 | 2.09E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 154 | 355 | 9.42E-17 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 34 | 109 | 4.5E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 131 | 481 | 9.5E-16 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 44 | 96 | 8.994076 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13570.2 | - | 0 |
| RefSeq | XP_021749865.1 | F-box/FBD/LRR-repeat protein At1g51370-like [Chenopodium quinoa] | 0 |
| Q9FZ70 | F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana OX=3702 GN=At1g13570 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B7BPX2 | F-box domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_040318 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology