Basic Information
Locus ID:
GOSA_00009527
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig83 | 2290017 | 2304501 | - | GOSA_00009527 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 93,151.37 Da | 44.08 | 79.98 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 380 | 428 | 1.2E-14 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 447 | 487 | 5.1E-7 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 162 | 217 | 9.4E-14 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 533 | 593 | 2.88E-8 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 646 | 777 | 1.85E-6 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 426 | 488 | 4.32E-16 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 438 | 502 | 1.8E-16 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 510 | 602 | 1.8E-11 | IPR013083 |
| SMART | SM00249 | PHD_3 | 535 | 592 | 0.14 | IPR001965 |
| SMART | SM00249 | PHD_3 | 446 | 487 | 2.3E-10 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 444 | 489 | 10.104099 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 447 | 486 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 345 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021732895.1 | uncharacterized protein LOC110699677 [Chenopodium quinoa] | 0 |
| Q9Z0E3 | Autoimmune regulator OS=Mus musculus OX=10090 GN=Aire PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M6E4 | PHD-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology