Basic Information
Locus ID:
GOSA_00009241
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig39 | 2468923 | 2472063 | + | GOSA_00009241 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 77,204.12 Da | 36.88 | 89.53 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 50 | 93 | 5.9E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 5.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 404 | 661 | 2.9E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 404 | 664 | 1.8E-47 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 246 | 5.29E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 476 | 686 | 1.2E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 474 | 5.8E-18 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 49 | 213 | 2.1E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 214 | 262 | 1.2E-6 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 676 | 25.121077 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 359 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_048494638.1 | pollen receptor-like kinase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MET9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology