Basic Information
Locus ID:
GOSA_00009240
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig39 | 2462312 | 2466462 | - | GOSA_00009240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 76,480.32 Da | 50.44 | 78.90 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 353 | 612 | 1.08209E-86 | - |
| CDD | cd01989 | STK_N | 25 | 177 | 1.18816E-41 | - |
| Pfam | PF00582 | Universal stress protein family | 26 | 149 | 2.3E-8 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 349 | 606 | 4.9E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 609 | 8.06E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 26 | 149 | 8.37E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 420 | 624 | 6.2E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 324 | 419 | 9.9E-27 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 25 | 159 | 1.3E-12 | IPR014729 |
| SMART | SM00220 | serkin_6 | 347 | 616 | 2.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 624 | 35.127949 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 465 | 477 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 648 | 673 | - | - |
| Coils | Coil | Coil | 213 | 240 | - | - |
| Coils | Coil | Coil | 276 | 316 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010669606.1 | U-box domain-containing protein 35 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LZ29 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology