Basic Information
Locus ID:
GOSA_00009180
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig39 | 1881497 | 1888775 | + | GOSA_00009180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 83,066.19 Da | 48.60 | 76.39 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 429 | 689 | 1.08564E-84 | - |
| CDD | cd01989 | STK_N | 17 | 122 | 1.10883E-43 | - |
| Pfam | PF00069 | Protein kinase domain | 423 | 675 | 6.9E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 682 | 3.37E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 89 | 2.09E-5 | - |
| Gene3D | G3DSA:3.40.50.12370 | - | 4 | 100 | 6.4E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 496 | 700 | 7.8E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 388 | 495 | 2.9E-25 | - |
| SMART | SM00220 | serkin_6 | 423 | 686 | 1.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 423 | 686 | 36.597885 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 541 | 553 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 147 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 724 | 743 | - | - |
| Coils | Coil | Coil | 290 | 310 | - | - |
| Coils | Coil | Coil | 316 | 336 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_048494654.1 | LOW QUALITY PROTEIN: U-box domain-containing protein 51 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LYV6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology