Basic Information
Locus ID:
GOSA_00008756
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig68 | 3090289 | 3094589 | + | GOSA_00008756 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 75,541.78 Da | 43.55 | 85.21 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 357 | 612 | 1.67985E-94 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 37 | 272 | 6.94822E-61 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 37 | 274 | 7.4E-47 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 352 | 611 | 4.9E-46 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 37 | 276 | 3.53E-50 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 336 | 654 | 2.29E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 336 | 427 | 1.6E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 428 | 624 | 1.0E-57 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 33 | 293 | 3.9E-61 | - |
| SMART | SM00220 | serkin_6 | 351 | 622 | 5.8E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 351 | 623 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 357 | 381 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 470 | 482 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 645 | 676 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65600.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021847043.1 | L-type lectin-domain containing receptor kinase IX.2-like [Spinacia oleracea] | 0 |
| Q9LSL5 | L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RB73 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_092870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg36599, jg36601 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17867 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah034687, Ah034688, Ah034689 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g030170 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21591, Sbi_jg22231 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg16156, Seu_jg16157, Seu_jg16158 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00008756, GOSA_00008758, GOSA_00008759, GOSA_00008760 |
| Amaranthaceae | Suaeda glauca | 9 | Sgl62700, Sgl62701, Sgl62702, Sgl62703, Sgl67262, Sgl67321 ... |
| Amaranthaceae | Chenopodium album | 7 | gene:ENSEOMG00000017184, gene:ENSEOMG00000019633 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.1BG0021020, CQ.Regalona.r1.2AG0022820 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30249920 |
| Apiaceae | Apium graveolens | 1 | Ag4G01692 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G2332 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2537 |
| Portulacaceae | Portulaca oleracea | 6 | evm.TU.LG04.3036, evm.TU.LG04.3038, evm.TU.LG16.568 ... |
| Salicaceae | Populus euphratica | 2 | populus_peu04773, populus_peu04774 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107027672, gene-LOC114073871 |
| Tamaricaceae | Reaumuria soongarica | 4 | STRG.32911_chr09_-, STRG.32912_chr09_-, gene_17258 ... |
| Tamaricaceae | Tamarix chinensis | 5 | TC01G1529, TC01G1531, TC02G0491, TC02G0493, TC02G0500 |