Basic Information
Locus ID:
GOSA_00008548
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig68 | 1172917 | 1176416 | + | GOSA_00008548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 68,051.52 Da | 43.91 | 106.32 | 0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 233 | 256 | 0.0045 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 530 | 551 | 0.052 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 556 | 576 | 0.73 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 260 | 283 | 0.26 | IPR001611 |
| Pfam | PF00646 | F-box domain | 68 | 107 | 8.7E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 336 | 581 | 4.71E-35 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 68 | 105 | 4.84E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 168 | 381 | 5.18E-32 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 436 | 500 | 2.4E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 61 | 111 | 7.6E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 566 | 636 | 1.9E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 435 | 1.5E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 154 | 246 | 2.9E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 502 | 565 | 5.5E-11 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 366 | 391 | 0.056 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 554 | 578 | 0.0034 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 472 | 497 | 1.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 528 | 553 | 15.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 182 | 207 | 0.0016 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 446 | 471 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 392 | 417 | 26.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 580 | 605 | 100.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 234 | 259 | 0.0018 | IPR006553 |
| SMART | SM00256 | fbox_2 | 71 | 112 | 1.9E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 501 | 526 | 1.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 340 | 365 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 260 | 285 | 1.1E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 208 | 233 | 1.8E-6 | IPR006553 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 65 | 115 | 8.755626 | IPR001810 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_010696236.1 | EIN3-binding F-box protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RGU6 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology