Basic Information
Locus ID:
GOSA_00008468
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig68 | 378917 | 382465 | - | GOSA_00008468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 65,691.10 Da | 33.43 | 100.37 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 55 | 4.9E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 134 | 329 | 2.51E-14 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 71 | 1.2E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 119 | 383 | 6.2E-14 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 57 | 8.6E-7 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59190.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_010693135.2 | uncharacterized protein LOC104906115 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q1PED9 | F-box/LRR-repeat protein At3g59190 OS=Arabidopsis thaliana OX=3702 GN=At3g59190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QA55 | F-box domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_207720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology