Basic Information
Locus ID:
GOSA_00008333
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig10 | 3552525 | 3554111 | - | GOSA_00008333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 58,555.57 Da | 45.68 | 84.22 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 42 | 79 | 7.63407E-4 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 241 | 498 | 1.4E-39 | IPR000719 |
| Pfam | PF04478 | Mid2 like cell wall stress sensor | 99 | 155 | 2.3E-5 | IPR007567 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 194 | 498 | 1.78E-62 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 41 | 95 | 1.5E-5 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 288 | 517 | 1.2E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 198 | 286 | 1.6E-13 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 164 | 506 | 30.859482 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 41 | 85 | 9.622705 | IPR018392 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021856141.1 | protein LYK5 isoform X1 [Spinacia oleracea] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S2X7 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_000660 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology