Basic Information
Locus ID:
GOSA_00008210
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig10 | 2363536 | 2367788 | + | GOSA_00008210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 30,896.57 Da | 28.04 | 66.94 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 15 | 275 | 2.0E-88 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 158 | 265 | 6.57E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 160 | 278 | 6.3E-44 | - |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 34 | 5.0 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 166 | 266 | 24.246042 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 77 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021848871.1 | auxin-responsive protein IAA16-like [Spinacia oleracea] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R4K3H3 | Auxin-responsive protein OS=Bassia scoparia OX=83154 GN=IAA16 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology