halophFGD

Basic Information

Locus ID: GOSA_00007227

Species & Taxonomic ID: Suaeda aralocaspica & 224144

Genome Assembly: GCA_016808085.1

Description: Heat Stress Transcription Factor

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Contig13	1646826	1658201	+	GOSA_00007227

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.50	39,158.06 Da	51.13	81.82	-0.56

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00447	HSF-type DNA-binding	89	171	4.5E-29	IPR000232
SUPERFAMILY	SSF46785	Winged helix DNA-binding domain	89	171	4.08E-29	IPR036390
Gene3D	G3DSA:1.10.10.10	-	84	173	7.0E-33	IPR036388
SMART	SM00415	hsfneu3	88	171	8.9E-45	IPR000232
ProSitePatterns	PS00434	HSF-type DNA-binding domain signature.	121	145	-	IPR000232
PRINTS	PR00056	Heat shock factor (HSF) domain signature	82	105	1.9E-14	IPR000232
PRINTS	PR00056	Heat shock factor (HSF) domain signature	120	132	1.9E-14	IPR000232
PRINTS	PR00056	Heat shock factor (HSF) domain signature	133	145	1.9E-14	IPR000232

Gene Ontology

Biological Process:

GO:0006355 (regulation of DNA-templated transcription)

Molecular Function:

GO:0003700 (DNA-binding transcription factor activity) GO:0043565 (sequence-specific DNA binding)

KEGG Pathway

KO Term:

K09419 (heat shock transcription factor, other eukaryote)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G46264.1	heat shock transcription factor B4. Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions.
RefSeq	XP_021734250.1	heat stress transcription factor B-4-like isoform X2 [Chenopodium quinoa]
Swiss-Prot	Q9C635	Heat stress transcription factor B-4 OS=Arabidopsis thaliana OX=3702 GN=HSFB4 PE=2 SV=1
TrEMBL	A0A803L3W7	HSF_DOMAIN domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	15	jg10665, jg11981, jg14015, jg15901, jg17439, jg22769, jg2318 ... jg31656, jg33253, jg37140, jg40033, jg40036, jg4326, jg4835, jg6247
Aizoaceae	Mesembryanthemum crystallinum	5	gene_10176, gene_16680, gene_1866, gene_19037, gene_3193
Amaranthaceae	Atriplex hortensis	5	Ah003793, Ah005090, Ah018933, Ah021881, Ah036472
Amaranthaceae	Beta vulgaris	4	BVRB_3g061640, BVRB_4g073880, BVRB_4g087490, BVRB_5g100880
Amaranthaceae	Salicornia bigelovii	11	Sbi_jg13018, Sbi_jg15544, Sbi_jg17771, Sbi_jg23726 ... Sbi_jg39439, Sbi_jg52854, Sbi_jg54901, Sbi_jg56367, Sbi_jg59347, Sbi_jg62428, Sbi_jg63278
Amaranthaceae	Salicornia europaea	6	Seu_jg1004, Seu_jg12465, Seu_jg14893, Seu_jg23607 ... Seu_jg26806, Seu_jg9014
Amaranthaceae	Suaeda aralocaspica	8	GOSA_00001257, GOSA_00001587, GOSA_00006563, GOSA_00007227 ... GOSA_00010228, GOSA_00010229, GOSA_00018358, GOSA_00018495
Amaranthaceae	Suaeda glauca	12	Sgl02025, Sgl02726, Sgl07178, Sgl07888, Sgl13173, Sgl18396 ... Sgl23928, Sgl29107, Sgl33947, Sgl39330, Sgl51922, Sgl57217
Amaranthaceae	Chenopodium album	16	gene:ENSEOMG00000000892, gene:ENSEOMG00000002309 ... gene:ENSEOMG00000006730, gene:ENSEOMG00000008538, gene:ENSEOMG00000012257, gene:ENSEOMG00000018265, gene:ENSEOMG00000022981, gene:ENSEOMG00000024317, gene:ENSEOMG00000027115, gene:ENSEOMG00000027561, gene:ENSEOMG00000029297, gene:ENSEOMG00000029901, gene:ENSEOMG00000034229, gene:ENSEOMG00000040389, gene:ENSEOMG00000045550, gene:ENSEOMG00000050029
Amaranthaceae	Chenopodium quinoa	11	CQ.Regalona.r1.1AG0020260, CQ.Regalona.r1.1BG0004700 ... CQ.Regalona.r1.3AG0002530, CQ.Regalona.r1.3AG0021250, CQ.Regalona.r1.3BG0002680, CQ.Regalona.r1.3BG0022080, CQ.Regalona.r1.4AG0002390, CQ.Regalona.r1.4BG0002460, CQ.Regalona.r1.5BG0008350, CQ.Regalona.r1.6AG0025000, CQ.Regalona.r1.6BG0026500
Anacardiaceae	Pistacia vera	7	pistato.v30045100, pistato.v30050490, pistato.v30143780 ... pistato.v30182490, pistato.v30186380, pistato.v30206410, pistato.v30226240
Apiaceae	Apium graveolens	8	Ag10G01872, Ag10G02349, Ag2G00355, Ag2G01987, Ag3G02367 ... Ag4G01086, Ag4G01404, Ag5G00279
Arecaceae	Cocos nucifera	9	COCNU_04G006210, COCNU_07G006910, COCNU_08G006550 ... COCNU_09G001500, COCNU_10G005150, COCNU_12G005010, COCNU_13G004220, scaffold001259G000050, scaffold003294G000010
Arecaceae	Phoenix dactylifera	10	gene-LOC103699664, gene-LOC103705040, gene-LOC103707697 ... gene-LOC103710335, gene-LOC103712507, gene-LOC103714164, gene-LOC103715062, gene-LOC103720270, gene-LOC120105251, gene-LOC120110536
Asparagaceae	Asparagus officinalis	3	AsparagusV1_02.1970.V1.1, AsparagusV1_07.1741.V1.1 ... AsparagusV1_08.404.V1.1
Asteraceae	Flaveria trinervia	10	Ftri10G17090, Ftri10G22792, Ftri13G12941, Ftri17G14460 ... Ftri18G17542, Ftri18G26673, Ftri3G08287, Ftri4G34148, Ftri6G33496, Ftri9G21614
Brassicaceae	Arabidopsis thaliana	5	AT1G46264.1, AT2G41690.1, AT4G11660.1, AT4G36990.1 ... AT5G62020.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10004690m.g.v1.0, Thhalv10012033m.g.v1.0 ... Thhalv10017795m.g.v1.0, Thhalv10025906m.g.v1.0, Thhalv10028744m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g34200.v2.2, Sp2g25190.v2.2, Sp4g23930.v2.2 ... Sp6g05810.v2.2, Sp7g34770.v2.2
Brassicaceae	Brassica nigra	10	BniB02g088350.2N, BniB04g002510.2N, BniB04g063860.2N ... BniB05g001730.2N, BniB06g010340.2N, BniB06g035920.2N, BniB07g009700.2N, BniB08g027140.2N, BniB08g036740.2N, BniB08g049840.2N
Casuarinaceae	Casuarina equisetifolia	5	Ceq02G2103, Ceq03G0435, Ceq03G1825, Ceq04G1037, Ceq05G1595
Casuarinaceae	Casuarina glauca	6	Cgl02G2176, Cgl03G0539, Cgl03G1966, Cgl04G1177, Cgl05G1317 ... Cgl05G1593
Cymodoceaceae	Cymodocea nodosa	6	gene.Cymno04g13260, gene.Cymno05g09960, gene.Cymno05g14390 ... gene.Cymno05g19790, gene.Cymno09g03440, gene.Cymno14g04780
Dunaliellaceae	Dunaliella salina	1	Dusal.0228s00018.v1.0
Hydrocharitaceae	Thalassia testudinum	9	gene.Thate01g09530, gene.Thate02g12350, gene.Thate02g14140 ... gene.Thate04g14990, gene.Thate07g04970, gene.Thate08g14770, gene.Thate08g18090, gene.Thate09g11270, gene.Thate09g12670
Malvaceae	Hibiscus hamabo Siebold & Zucc.	5	nbisL1-mrna-10536, nbisL1-mrna-11266, nbisL1-mrna-1259 ... nbisL1-mrna-4387, nbisL1-mrna-7086
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG01.2557, evm.TU.LG02.2144, evm.TU.LG06.418 ... evm.TU.LG09.100, evm.TU.LG09.102, evm.TU.LG10.1359
Plantaginaceae	Plantago ovata	5	Pov_00003137, Pov_00006702, Pov_00023928, Pov_00027605 ... Pov_00040927
Plumbaginaceae	Limonium bicolor	6	Lb1G07853, Lb2G10739, Lb2G10749, Lb3G16229, Lb3G20834 ... Lb4G25843
Poaceae	Echinochloa crus-galli	22	AH01.3533, AH03.2154, AH03.2164, AH03.2679, AH03.3856 ... AH08.2285, AH09.1959, BH01.3888, BH03.2233, BH03.2247, BH03.2820, BH03.4139, BH07.1495, BH08.2426, BH09.2126, CH01.4149, CH03.2481, CH03.2492, CH03.3022, CH07.379, CH08.2623, CH09.2270
Poaceae	Eleusine coracana subsp. coracana	13	gene-QOZ80_3AG0249420, gene-QOZ80_3BG0278780 ... gene-QOZ80_4AG0307070, gene-QOZ80_4BG0338070, gene-QOZ80_6AG0528830, gene-QOZ80_6AG0537420, gene-QOZ80_6AG0537530, gene-QOZ80_6BG0482870, gene-QOZ80_6BG0490650, gene-QOZ80_6BG0490760, gene-QOZ80_7AG0579160, gene-QOZ80_7BG0610410, gene-QOZ80_8AG0639710
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.2HG0119970.1, HORVU.MOREX.r3.2HG0187550.1 ... HORVU.MOREX.r3.5HG0486260.1, HORVU.MOREX.r3.5HG0486440.1, HORVU.MOREX.r3.5HG0497990.1, HORVU.MOREX.r3.7HG0686980.1
Poaceae	Lolium multiflorum	8	gene-QYE76_005654, gene-QYE76_005678, gene-QYE76_006754 ... gene-QYE76_011139, gene-QYE76_039305, gene-QYE76_045621, gene-QYE76_067638, gene-QYE76_067687
Poaceae	Oryza coarctata	14	Oco05G014230, Oco06G012070, Oco07G013410, Oco08G012950 ... Oco13G014010, Oco14G014850, Oco15G014020, Oco16G013210, Oco17G006440, Oco17G006510, Oco17G009930, Oco18G006650, Oco18G006730, Oco18G009930
Poaceae	Oryza sativa	8	LOC_Os03g25120.1, LOC_Os04g48030.1, LOC_Os07g44690.1 ... LOC_Os08g43334.1, LOC_Os09g28200.1, LOC_Os09g28354.1, LOC_Os09g35790.1, LOC_Os11g08970.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G345200, gene-BS78_02G203200 ... gene-BS78_02G204100, gene-BS78_02G249200, gene-BS78_02G367500, gene-BS78_06G203300, gene-BS78_07G217600
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0304861, Pt_Chr0307356, Pt_Chr0403462, Pt_Chr0403478 ... Pt_Chr0403479, Pt_Chr0701212, Pt_Chr0701917, Pt_Chr0701929
Poaceae	Sporobolus alterniflorus	24	Chr04G012010, Chr07G011300, Chr0G028300, Chr0G028360 ... Chr0G028680, Chr0G028750, Chr10G013750, Chr11G008570, Chr14G010700, Chr14G015100, Chr14G015170, Chr16G018690, Chr17G017730, Chr20G002670, Chr21G010800, Chr21G014170, Chr21G014230, Chr23G006300, Chr24G013880, Chr25G005240, Chr26G013200, Chr27G016020, Chr28G012870, Chr30G005100
Poaceae	Thinopyrum elongatum	6	Tel2E01G297400, Tel2E01G687900, Tel5E01G383900 ... Tel5E01G385600, Tel5E01G502600, Tel7E01G472900
Poaceae	Triticum dicoccoides	12	gene_TRIDC2AG018340, gene_TRIDC2AG058030 ... gene_TRIDC2BG022240, gene_TRIDC2BG060950, gene_TRIDC5AG037590, gene_TRIDC5AG037620, gene_TRIDC5AG046650, gene_TRIDC5BG039670, gene_TRIDC5BG039720, gene_TRIDC5BG050430, gene_TRIDC7AG035420, gene_TRIDC7BG026590
Poaceae	Triticum aestivum	18	TraesCS2A02G146600.1, TraesCS2A02G401600.1 ... TraesCS2B02G171900.1, TraesCS2B02G419600.1, TraesCS2D02G151200.1, TraesCS2D02G399000.1, TraesCS5A02G237600.1, TraesCS5A02G237900.1, TraesCS5A02G314700.1, TraesCS5B02G236100.1, TraesCS5B02G236400.1, TraesCS5B02G315600.1, TraesCS5D02G243900.1, TraesCS5D02G244800.1, TraesCS5D02G321000.1, TraesCS7A02G270100.1, TraesCS7B02G168300.2, TraesCS7D02G270600.1
Poaceae	Zea mays	10	Zm00001eb017880_P001, Zm00001eb037600_P002 ... Zm00001eb100410_P001, Zm00001eb100770_P001, Zm00001eb198620_P001, Zm00001eb314790_P001, Zm00001eb314890_P001, Zm00001eb319350_P002, Zm00001eb328900_P001, Zm00001eb428800_P001
Poaceae	Zoysia japonica	10	nbis-gene-17593, nbis-gene-19672, nbis-gene-19673 ... nbis-gene-19685, nbis-gene-22582, nbis-gene-246, nbis-gene-30616, nbis-gene-30626, nbis-gene-33107, nbis-gene-5586
Poaceae	Zoysia macrostachya	10	Zma_g20257, Zma_g21803, Zma_g24481, Zma_g30044, Zma_g30431 ... Zma_g30438, Zma_g32660, Zma_g32666, Zma_g5664, Zma_g6952
Portulacaceae	Portulaca oleracea	11	evm.TU.LG03.369, evm.TU.LG04.3425, evm.TU.LG08.1420 ... evm.TU.LG10.1107, evm.TU.LG11.1605, evm.TU.LG12.1335, evm.TU.LG13.1188, evm.TU.LG16.163, evm.TU.LG17.1110, evm.TU.LG21.855, evm.TU.LG22.316
Posidoniaceae	Posidonia oceanica	4	gene.Posoc01g21810, gene.Posoc01g30180, gene.Posoc04g18190 ... gene.Posoc06g11520
Rhizophoraceae	Bruguiera sexangula	12	evm.TU.43292.1, evm.TU.60364.9, evm.TU.Scaffold_3_RagTag.142 ... evm.TU.Scaffold_11_RagTag.1358, evm.TU.Scaffold_14_RagTag.217, evm.TU.Scaffold_16_RagTag.213, evm.TU.Scaffold_1_RagTag.1151, evm.TU.Scaffold_2_RagTag.1181, evm.TU.Scaffold_4_RagTag.143, evm.TU.Scaffold_6_RagTag.1879, evm.TU.Scaffold_7_RagTag.742, evm.TU.Scaffold_8_RagTag.968
Rhizophoraceae	Carallia pectinifolia	11	nbisL1-mrna-12657, nbisL1-mrna-17266, nbisL1-mrna-18162 ... nbisL1-mrna-19176, nbisL1-mrna-22458, nbisL1-mrna-29201, nbisL1-mrna-3829, nbisL1-mrna-605, nbisL1-mrna-6469, nbisL1-mrna-690, nbisL1-mrna-8879
Rhizophoraceae	Ceriops tagal	9	nbisL1-mrna-11854, nbisL1-mrna-14851, nbisL1-mrna-17257 ... nbisL1-mrna-1780, nbisL1-mrna-17850, nbisL1-mrna-19055, nbisL1-mrna-20072, nbisL1-mrna-6258, nbisL1-mrna-7230
Rhizophoraceae	Ceriops zippeliana	9	nbisL1-mrna-11904, nbisL1-mrna-18814, nbisL1-mrna-20295 ... nbisL1-mrna-20676, nbisL1-mrna-2140, nbisL1-mrna-4271, nbisL1-mrna-6072, nbisL1-mrna-6600, nbisL1-mrna-8492
Rhizophoraceae	Kandelia candel	10	evm.TU.utg000002l.597, evm.TU.utg000007l.240 ... evm.TU.utg000008l.87, evm.TU.utg000009l.521, evm.TU.utg000010l.354, evm.TU.utg000011l.1145, evm.TU.utg000016l.815, evm.TU.utg000018l.310, evm.TU.utg000019l.1031, evm.TU.utg000022l.362
Rhizophoraceae	Kandelia obovata	10	Maker00001355, Maker00002933, Maker00005272, Maker00007103 ... Maker00009004, Maker00010572, Maker00012870, Maker00014295, Maker00016327, Maker00018573
Rhizophoraceae	Rhizophora apiculata	8	nbisL1-mrna-11000, nbisL1-mrna-11415, nbisL1-mrna-12424 ... nbisL1-mrna-15506, nbisL1-mrna-16063, nbisL1-mrna-2366, nbisL1-mrna-3506, nbisL1-mrna-8255
Rhizophoraceae	Rhizophora mangle	9	nbisL1-mrna-10007, nbisL1-mrna-10863, nbisL1-mrna-13348 ... nbisL1-mrna-2233, nbisL1-mrna-23839, nbisL1-mrna-3212, nbisL1-mrna-5545, nbisL1-mrna-6261, nbisL1-mrna-6653
Salicaceae	Populus euphratica	9	populus_peu01804, populus_peu03528, populus_peu10936 ... populus_peu23396, populus_peu26092, populus_peu29254, populus_peu30616, populus_peu31992, populus_peu36016
Solanaceae	Lycium barbarum	7	gene-LOC132599652, gene-LOC132607473, gene-LOC132614596 ... gene-LOC132625215, gene-LOC132627846, gene-LOC132631871, gene-LOC132634949
Solanaceae	Solanum chilense	6	SOLCI000172600, SOLCI001252500, SOLCI001795900 ... SOLCI001805700, SOLCI007408200, SOLCI007429200
Solanaceae	Solanum pennellii	7	gene-LOC107002051, gene-LOC107004387, gene-LOC107009097 ... gene-LOC107012083, gene-LOC107016322, gene-LOC107017220, gene-LOC107028346
Tamaricaceae	Reaumuria soongarica	6	STRG.27964_chr04_-, gene_10019, gene_12257, gene_1731 ... gene_3186, gene_4048
Tamaricaceae	Tamarix chinensis	6	TC02G2940, TC04G1733, TC04G2538, TC06G0254, TC06G2475 ... TC08G1638
Zosteraceae	Zostera marina	4	Zosma01g21410.v3.1, Zosma01g27440.v3.1, Zosma03g34990.v3.1 ... Zosma05g34010.v3.1