Basic Information
Locus ID:
GOSA_00007220
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Short Name:
CPK17
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig13 | 1581387 | 1582027 | + | GOSA_00007220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 15,891.02 Da | 39.83 | 83.05 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 85 | 128 | 5.08213E-8 | IPR002048 |
| Pfam | PF00036 | EF hand | 103 | 129 | 3.5E-9 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 74 | 1.66E-9 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 80 | 133 | 1.04E-10 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 56 | 4.8E-11 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 75 | 95 | 1.2E-18 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 96 | 133 | 1.2E-18 | - |
| SMART | SM00054 | efh_1 | 102 | 130 | 1.2E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 98 | 133 | 15.573431 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 111 | 123 | - | IPR018247 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12180.1 | calcium-dependent protein kinase 17. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021772196.1 | calcium-dependent protein kinase 17-like [Chenopodium quinoa] | 0 |
| Q9FMP5 | Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KME7 | Calcium-dependent protein kinase 17 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg34399 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_19562 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007220 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl25550, Sgl30703 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000008975, gene:ENSEOMG00000031084 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4AG0012670, CQ.Regalona.r1.4AG0012680 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30169580 |
| Apiaceae | Apium graveolens | 1 | Ag2G00792 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103705021 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.1981.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri6G11136 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq05G0591, Ceq05G0594 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G0614 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g12160 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0099s00008.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g09440 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.1314 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G05602 |
| Poaceae | Echinochloa crus-galli | 10 | AH04.203, AH05.119, AH05.120, BH04.194, BH04.196, BH05.137 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_5BG0427490 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0356720.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_065207 |
| Poaceae | Oryza coarctata | 2 | Oco22G001310, Oco24G000680 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g04160.1, LOC_Os12g03960.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G033300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103714, Pt_Chr0103731 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr07G021740 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G202900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG030010, gene_TRIDC4BG020550 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G187800.1, TraesCS4B02G130400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb196200_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-40126, nbis-gene-52931, nbis-gene-54808 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g17533, Zma_g25469, Zma_g25470 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g28240 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_2_RagTag.1254 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3903 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17301 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000009l.473 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00005305 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-12378 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-5482 |
| Salicaceae | Populus euphratica | 1 | populus_peu19960 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132615126 |
| Solanaceae | Solanum chilense | 1 | SOLCI007391600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004462 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_13322 |
| Tamaricaceae | Tamarix chinensis | 1 | TC11G1688 |
| Zosteraceae | Zostera marina | 1 | Zosma03g17480.v3.1 |