Basic Information
Locus ID:
GOSA_00007155
Species & Taxonomic ID:
Suaeda aralocaspica & 224144
Genome Assembly:
GCA_016808085.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Contig13 | 902989 | 903432 | + | GOSA_00007155 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 17,285.35 Da | 40.66 | 78.78 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010673686.1 | F-box protein At3g07870 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A0K9R4C1 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_113500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_10001 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g073130 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg17883, Sbi_jg62512 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1088 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007155 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl59201 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0001810, CQ.Regalona.r1.4BG0001880 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005517 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG22.674 |
| Solanaceae | Solanum chilense | 1 | SOLCI005962200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107030802 |